Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC29.39■■■□□ 2.29
Shroom2A2ALU4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Gm13884-201ENSMUST00000118103 829 ntBASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Shroom2A2ALU4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Shroom2A2ALU4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Shroom2A2ALU4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
Shroom2A2ALU4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Shroom2A2ALU4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Shroom2A2ALU4 Gm20100-201ENSMUST00000209418 2272 ntBASIC29.37■■■□□ 2.29
Shroom2A2ALU4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Gm38027-201ENSMUST00000192315 235 ntBASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Shroom2A2ALU4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Gm4217-201ENSMUST00000182243 1002 ntBASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Otx2os1-206ENSMUST00000228153 787 ntBASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Shroom2A2ALU4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
Shroom2A2ALU4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Shroom2A2ALU4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Shroom2A2ALU4 Snhg20-203ENSMUST00000182811 2153 ntBASIC29.34■■■□□ 2.29
Shroom2A2ALU4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Shroom2A2ALU4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Shroom2A2ALU4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Shroom2A2ALU4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Shroom2A2ALU4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Shroom2A2ALU4 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC29.33■■■□□ 2.29
Shroom2A2ALU4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC29.33■■■□□ 2.29
Shroom2A2ALU4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC29.33■■■□□ 2.29
Shroom2A2ALU4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Shroom2A2ALU4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Shroom2A2ALU4 Mir8098-201ENSMUST00000184011 137 ntBASIC29.32■■■□□ 2.28
Shroom2A2ALU4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Shroom2A2ALU4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Shroom2A2ALU4 Gm12504-201ENSMUST00000120860 2231 ntBASIC29.32■■■□□ 2.28
Shroom2A2ALU4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shroom2A2ALU4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shroom2A2ALU4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shroom2A2ALU4 Gm38285-201ENSMUST00000192928 922 ntBASIC29.31■■■□□ 2.28
Shroom2A2ALU4 Birc2-201ENSMUST00000054878 378 ntBASIC29.31■■■□□ 2.28
Shroom2A2ALU4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shroom2A2ALU4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Shroom2A2ALU4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Shroom2A2ALU4 Gm12085-201ENSMUST00000119263 940 ntBASIC29.3■■■□□ 2.28
Shroom2A2ALU4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC29.3■■■□□ 2.28
Shroom2A2ALU4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Shroom2A2ALU4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Shroom2A2ALU4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Shroom2A2ALU4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Shroom2A2ALU4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Shroom2A2ALU4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Shroom2A2ALU4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Shroom2A2ALU4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC29.28■■■□□ 2.28
Shroom2A2ALU4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC29.28■■■□□ 2.28
Shroom2A2ALU4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Shroom2A2ALU4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Shroom2A2ALU4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
Shroom2A2ALU4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC29.26■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms