Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccdc112A0AUP1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc112A0AUP1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc112A0AUP1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc112A0AUP1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc112A0AUP1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ccdc112A0AUP1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Ccdc112A0AUP1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Ccdc112A0AUP1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccdc112A0AUP1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Ccdc112A0AUP1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc112A0AUP1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc112A0AUP1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ccdc112A0AUP1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Ccdc112A0AUP1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc112A0AUP1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ccdc112A0AUP1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ccdc112A0AUP1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ccdc112A0AUP1 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Gm13146-201ENSMUST00000118508 780 ntBASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ccdc112A0AUP1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.97■□□□□ 0.95
Ccdc112A0AUP1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ccdc112A0AUP1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc112A0AUP1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Ccdc112A0AUP1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc112A0AUP1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.96■□□□□ 0.95
Ccdc112A0AUP1 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.96■□□□□ 0.95
Ccdc112A0AUP1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ccdc112A0AUP1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccdc112A0AUP1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Ccdc112A0AUP1 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.95■□□□□ 0.95
Ccdc112A0AUP1 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc112A0AUP1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc112A0AUP1 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.95■□□□□ 0.94
Ccdc112A0AUP1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.95■□□□□ 0.94
Ccdc112A0AUP1 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.95■□□□□ 0.94
Ccdc112A0AUP1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.95■□□□□ 0.94
Ccdc112A0AUP1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ccdc112A0AUP1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms