Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smim17A0A504 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Smim17A0A504 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.7■□□□□ 0.26
Smim17A0A504 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.7■□□□□ 0.26
Smim17A0A504 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.7■□□□□ 0.26
Smim17A0A504 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Smim17A0A504 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smim17A0A504 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smim17A0A504 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smim17A0A504 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Smim17A0A504 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Smim17A0A504 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smim17A0A504 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.68■□□□□ 0.26
Smim17A0A504 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Gm43530-201ENSMUST00000195920 274 ntBASIC16.68■□□□□ 0.26
Smim17A0A504 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.68■□□□□ 0.26
Smim17A0A504 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smim17A0A504 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Smim17A0A504 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smim17A0A504 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.67■□□□□ 0.26
Smim17A0A504 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.67■□□□□ 0.26
Smim17A0A504 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smim17A0A504 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smim17A0A504 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smim17A0A504 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.66■□□□□ 0.26
Smim17A0A504 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smim17A0A504 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smim17A0A504 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Smim17A0A504 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.66■□□□□ 0.26
Smim17A0A504 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smim17A0A504 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smim17A0A504 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim17A0A504 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Smim17A0A504 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Smim17A0A504 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smim17A0A504 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smim17A0A504 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.64■□□□□ 0.25
Smim17A0A504 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.64■□□□□ 0.25
Smim17A0A504 Gm10399-202ENSMUST00000202768 748 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms