Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Igkv3-3A0A140T8Q0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Igkv3-3A0A140T8Q0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Igkv3-3A0A140T8Q0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 BC021767-201ENSMUST00000126387 1716 ntBASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv3-3A0A140T8Q0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Gm13238-201ENSMUST00000117655 780 ntBASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv3-3A0A140T8Q0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv3-3A0A140T8Q0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Igkv3-3A0A140T8Q0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Igkv3-3A0A140T8Q0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Gm15820-201ENSMUST00000201566 728 ntBASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv3-3A0A140T8Q0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms