Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc194A0A140LIT1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ccdc194A0A140LIT1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ccdc194A0A140LIT1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc194A0A140LIT1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc194A0A140LIT1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc194A0A140LIT1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ccdc194A0A140LIT1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.3■□□□□ 0.52
Ccdc194A0A140LIT1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ccdc194A0A140LIT1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
Ccdc194A0A140LIT1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Gm9988-201ENSMUST00000069786 435 ntBASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ccdc194A0A140LIT1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ccdc194A0A140LIT1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.27■□□□□ 0.52
Ccdc194A0A140LIT1 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.27■□□□□ 0.51
Ccdc194A0A140LIT1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.27■□□□□ 0.51
Ccdc194A0A140LIT1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc194A0A140LIT1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc194A0A140LIT1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ccdc194A0A140LIT1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms