Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhgb8A0A140LI48 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm42642-201ENSMUST00000200683 355 ntBASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhgb8A0A140LI48 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhgb8A0A140LI48 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdhgb8A0A140LI48 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm10849-201ENSMUST00000100397 618 ntBASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm27801-201ENSMUST00000184174 223 ntBASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhgb8A0A140LI48 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhgb8A0A140LI48 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhgb8A0A140LI48 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.55■□□□□ 0.24
Pcdhgb8A0A140LI48 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.54■□□□□ 0.24
Pcdhgb8A0A140LI48 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgb8A0A140LI48 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhgb8A0A140LI48 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.54■□□□□ 0.24
Pcdhgb8A0A140LI48 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhgb8A0A140LI48 Gm27405-201ENSMUST00000184201 112 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms