Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9988-201ENSMUST00000069786 435 ntBASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.11■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Reep4-203ENSMUST00000226563 1444 ntBASIC16.11■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13534-201ENSMUST00000121169 513 ntBASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Fst-202ENSMUST00000223640 2612 ntBASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.09■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms