Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav23A0A0G2JG17 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav23A0A0G2JG17 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav23A0A0G2JG17 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Gm13534-201ENSMUST00000121169 513 ntBASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav23A0A0G2JG17 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav23A0A0G2JG17 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav23A0A0G2JG17 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav23A0A0G2JG17 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav23A0A0G2JG17 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav23A0A0G2JG17 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav23A0A0G2JG17 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav23A0A0G2JG17 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav23A0A0G2JG17 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav23A0A0G2JG17 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Gm5540-201ENSMUST00000131852 1848 ntBASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav23A0A0G2JG17 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav23A0A0G2JG17 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.99□□□□□ -0.01
Trav23A0A0G2JG17 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav23A0A0G2JG17 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav23A0A0G2JG17 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav23A0A0G2JG17 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav23A0A0G2JG17 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms