Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Gm12933-201ENSMUST00000120203 872 ntBASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Grk6-206ENSMUST00000224995 2971 ntBASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.66□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm13146-201ENSMUST00000118508 780 ntBASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.65□□□□□ -0.22
Trbv13-1A0A0B4J1P8 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms