Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav9-4A0A0B4J1K2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm37179-201ENSMUST00000194862 823 ntBASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.82□□□□□ -0.2
Trav9-4A0A0B4J1K2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm6365-201ENSMUST00000054711 744 ntBASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav9-4A0A0B4J1K2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav9-4A0A0B4J1K2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav9-4A0A0B4J1K2 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms