Protein–RNA interactions for Protein: A0A0B4J1J4

Ighv9-2, Immunoglobulin heavy variable V9-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-2A0A0B4J1J4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Gm26571-201ENSMUST00000181399 666 ntBASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.4■□□□□ 0.06
Ighv9-2A0A0B4J1J4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ighv9-2A0A0B4J1J4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm7290-201ENSMUST00000104990 617 ntBASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm12918-201ENSMUST00000120234 636 ntBASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm15710-201ENSMUST00000121821 636 ntBASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm5075-201ENSMUST00000196916 622 ntBASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ighv9-2A0A0B4J1J4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms