Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.83■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.83■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.83■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.83■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm18666-201ENSMUST00000190039 958 ntBASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Mtag2-201ENSMUST00000058665 714 ntBASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.81■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm10698-201ENSMUST00000182663 604 ntBASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.79■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Golph3-205ENSMUST00000228671 2842 ntBASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Igkv5-43A0A0B4J1J2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms