Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv5A0A0B4J1G9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv5A0A0B4J1G9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv5A0A0B4J1G9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv5A0A0B4J1G9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv5A0A0B4J1G9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trbv5A0A0B4J1G9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv5A0A0B4J1G9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Trbv5A0A0B4J1G9 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.77□□□□□ -0.04
Trbv5A0A0B4J1G9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
Trbv5A0A0B4J1G9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trbv5A0A0B4J1G9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.77□□□□□ -0.05
Trbv5A0A0B4J1G9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trbv5A0A0B4J1G9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.77□□□□□ -0.05
Trbv5A0A0B4J1G9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv5A0A0B4J1G9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv5A0A0B4J1G9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv5A0A0B4J1G9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms