Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv2A0A0B4J1G8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv2A0A0B4J1G8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm8969-201ENSMUST00000199694 526 ntBASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm9847-201ENSMUST00000052528 599 ntBASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv2A0A0B4J1G8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv2A0A0B4J1G8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv2A0A0B4J1G8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms