Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav21-dv12A0A075B6C4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav21-dv12A0A075B6C4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav21-dv12A0A075B6C4 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav21-dv12A0A075B6C4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms