Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-7A0A075B6B0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-7A0A075B6B0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-7A0A075B6B0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-7A0A075B6B0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-7A0A075B6B0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Trav6d-7A0A075B6B0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-7A0A075B6B0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav6d-7A0A075B6B0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-7A0A075B6B0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-7A0A075B6B0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trav6d-7A0A075B6B0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-7A0A075B6B0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-7A0A075B6B0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm27801-201ENSMUST00000184174 223 ntBASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav6d-7A0A075B6B0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm7291-201ENSMUST00000199147 382 ntBASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-7A0A075B6B0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-7A0A075B6B0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm27405-201ENSMUST00000184201 112 ntBASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6d-7A0A075B6B0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6d-7A0A075B6B0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms