Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trav9d-1A0A075B699 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9d-1A0A075B699 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav9d-1A0A075B699 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9d-1A0A075B699 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9d-1A0A075B699 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9d-1A0A075B699 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Fst-202ENSMUST00000223640 2612 ntBASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9d-1A0A075B699 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms