Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv1A0A075B657 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv1A0A075B657 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv1A0A075B657 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv1A0A075B657 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trdv1A0A075B657 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv1A0A075B657 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv1A0A075B657 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trdv1A0A075B657 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trdv1A0A075B657 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Gm27801-201ENSMUST00000184174 223 ntBASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trdv1A0A075B657 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trdv1A0A075B657 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trdv1A0A075B657 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14□□□□□ -0.17
Trdv1A0A075B657 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14□□□□□ -0.17
Trdv1A0A075B657 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trdv1A0A075B657 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trdv1A0A075B657 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trdv1A0A075B657 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trdv1A0A075B657 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.99□□□□□ -0.17
Trdv1A0A075B657 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trdv1A0A075B657 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.98□□□□□ -0.17
Trdv1A0A075B657 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv1A0A075B657 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv1A0A075B657 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trdv1A0A075B657 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trdv1A0A075B657 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trdv1A0A075B657 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms