Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Gm14117-201ENSMUST00000122417 843 ntBASIC14.62□□□□□ -0.07
Trav17A0A075B655 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Gm45102-201ENSMUST00000207427 857 ntBASIC14.62□□□□□ -0.07
Trav17A0A075B655 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Rps24-207ENSMUST00000224568 714 ntBASIC14.62□□□□□ -0.07
Trav17A0A075B655 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav17A0A075B655 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Trav17A0A075B655 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Trav17A0A075B655 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav17A0A075B655 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.59□□□□□ -0.07
Trav17A0A075B655 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.59□□□□□ -0.07
Trav17A0A075B655 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav17A0A075B655 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav17A0A075B655 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav17A0A075B655 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.58□□□□□ -0.08
Trav17A0A075B655 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav17A0A075B655 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav17A0A075B655 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.57□□□□□ -0.08
Trav17A0A075B655 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms