Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav5-4A0A075B652 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav5-4A0A075B652 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.33■□□□□ 0.05
Trav5-4A0A075B652 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Trav5-4A0A075B652 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav5-4A0A075B652 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trav5-4A0A075B652 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav5-4A0A075B652 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav5-4A0A075B652 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Gm9988-201ENSMUST00000069786 435 ntBASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav5-4A0A075B652 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav5-4A0A075B652 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms