Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Gm45444-201ENSMUST00000211394 898 ntBASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav8-1A0A075B641 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8-1A0A075B641 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8-1A0A075B641 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8-1A0A075B641 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8-1A0A075B641 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav8-1A0A075B641 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav8-1A0A075B641 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trav8-1A0A075B641 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav8-1A0A075B641 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Gm10399-202ENSMUST00000202768 748 ntBASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav8-1A0A075B641 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.18□□□□□ -0.3
Trav8-1A0A075B641 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms