Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav8n-2A0A075B633 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Gm15375-201ENSMUST00000119510 849 ntBASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Gm30025-201ENSMUST00000218555 728 ntBASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav8n-2A0A075B633 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Gm10231-201ENSMUST00000181584 441 ntBASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Gm10175-202ENSMUST00000208752 441 ntBASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav8n-2A0A075B633 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Gm18025-201ENSMUST00000221733 862 ntBASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav8n-2A0A075B633 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav8n-2A0A075B633 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trav8n-2A0A075B633 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav8n-2A0A075B633 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Gm21814-202ENSMUST00000203277 873 ntBASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trav8n-2A0A075B633 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms