Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav4d-3A0A075B625 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav4d-3A0A075B625 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav4d-3A0A075B625 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav4d-3A0A075B625 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav4d-3A0A075B625 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4d-3A0A075B625 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4d-3A0A075B625 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4d-3A0A075B625 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav4d-3A0A075B625 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4d-3A0A075B625 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav4d-3A0A075B625 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav4d-3A0A075B625 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav4d-3A0A075B625 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms