Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav4n-4A0A075B615 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav4n-4A0A075B615 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Gm43530-201ENSMUST00000195920 274 ntBASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav4n-4A0A075B615 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav4n-4A0A075B615 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav4n-4A0A075B615 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4n-4A0A075B615 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4n-4A0A075B615 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4n-4A0A075B615 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4n-4A0A075B615 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4n-4A0A075B615 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Trav4n-4A0A075B615 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav4n-4A0A075B615 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav4n-4A0A075B615 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Gm10399-202ENSMUST00000202768 748 ntBASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav4n-4A0A075B615 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms