Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav9-1A0A075B601 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav9-1A0A075B601 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav9-1A0A075B601 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav9-1A0A075B601 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav9-1A0A075B601 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trav9-1A0A075B601 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9-1A0A075B601 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9-1A0A075B601 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9-1A0A075B601 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav9-1A0A075B601 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.33□□□□□ -0.12
Trav9-1A0A075B601 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms