Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav5-1A0A075B5Z7 Notumos-201ENSMUST00000151998 2659 ntBASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm12896-201ENSMUST00000118430 226 ntBASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm10653-202ENSMUST00000139570 835 ntBASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Trmt13-210ENSMUST00000198454 880 ntBASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav5-1A0A075B5Z7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm8520-201ENSMUST00000186517 868 ntBASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trav5-1A0A075B5Z7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Flg-201ENSMUST00000050758 1488 ntBASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm37856-201ENSMUST00000191634 999 ntBASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav5-1A0A075B5Z7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav5-1A0A075B5Z7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Dio3-201ENSMUST00000097228 1449 ntBASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 BC021767-201ENSMUST00000126387 1716 ntBASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav5-1A0A075B5Z7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms