Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trbv4A0A075B5I2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbv4A0A075B5I2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Gm10849-201ENSMUST00000100397 618 ntBASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trbv4A0A075B5I2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Gm26571-201ENSMUST00000181399 666 ntBASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbv4A0A075B5I2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trbv4A0A075B5I2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.41■□□□□ 0.54
Trbv4A0A075B5I2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv4A0A075B5I2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv4A0A075B5I2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv4A0A075B5I2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv4A0A075B5I2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv4A0A075B5I2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv4A0A075B5I2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv4A0A075B5I2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv4A0A075B5I2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trbv4A0A075B5I2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trbv4A0A075B5I2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv4A0A075B5I2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms