Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rtp4Q9ER80 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rtp4Q9ER80 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.2■■□□□ 1.3
Rtp4Q9ER80 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.2■■□□□ 1.3
Rtp4Q9ER80 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp4Q9ER80 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp4Q9ER80 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp4Q9ER80 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.18■■□□□ 1.3
Rtp4Q9ER80 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtp4Q9ER80 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rtp4Q9ER80 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtp4Q9ER80 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtp4Q9ER80 Gm24970-201ENSMUST00000175582 82 ntBASIC23.13■■□□□ 1.29
Rtp4Q9ER80 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtp4Q9ER80 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtp4Q9ER80 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rtp4Q9ER80 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtp4Q9ER80 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp4Q9ER80 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp4Q9ER80 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp4Q9ER80 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.08■■□□□ 1.28
Rtp4Q9ER80 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp4Q9ER80 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp4Q9ER80 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp4Q9ER80 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp4Q9ER80 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.05■■□□□ 1.28
Rtp4Q9ER80 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rtp4Q9ER80 Amer2-203ENSMUST00000225247 2662 ntBASIC23.05■■□□□ 1.28
Rtp4Q9ER80 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.05■■□□□ 1.28
Rtp4Q9ER80 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtp4Q9ER80 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Rtp4Q9ER80 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp4Q9ER80 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp4Q9ER80 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtp4Q9ER80 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.98■■□□□ 1.27
Rtp4Q9ER80 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp4Q9ER80 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp4Q9ER80 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.96■■□□□ 1.27
Rtp4Q9ER80 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp4Q9ER80 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp4Q9ER80 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp4Q9ER80 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp4Q9ER80 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp4Q9ER80 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp4Q9ER80 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp4Q9ER80 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rtp4Q9ER80 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtp4Q9ER80 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtp4Q9ER80 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.92■■□□□ 1.26
Rtp4Q9ER80 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp4Q9ER80 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp4Q9ER80 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
Rtp4Q9ER80 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Rtp4Q9ER80 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Rtp4Q9ER80 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp4Q9ER80 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp4Q9ER80 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rtp4Q9ER80 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rtp4Q9ER80 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Rtp4Q9ER80 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtp4Q9ER80 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtp4Q9ER80 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.86■■□□□ 1.25
Rtp4Q9ER80 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp4Q9ER80 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Rtp4Q9ER80 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.84■■□□□ 1.25
Rtp4Q9ER80 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtp4Q9ER80 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtp4Q9ER80 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Rtp4Q9ER80 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Rtp4Q9ER80 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.82■■□□□ 1.24
Rtp4Q9ER80 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rtp4Q9ER80 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rtp4Q9ER80 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.82■■□□□ 1.24
Rtp4Q9ER80 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp4Q9ER80 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp4Q9ER80 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.79■■□□□ 1.24
Rtp4Q9ER80 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp4Q9ER80 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.79■■□□□ 1.24
Rtp4Q9ER80 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp4Q9ER80 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp4Q9ER80 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms