Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rtp4Q9ER80 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rtp4Q9ER80 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.2■■□□□ 1.3
Rtp4Q9ER80 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.2■■□□□ 1.3
Rtp4Q9ER80 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtp4Q9ER80 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp4Q9ER80 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp4Q9ER80 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtp4Q9ER80 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.18■■□□□ 1.3
Rtp4Q9ER80 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtp4Q9ER80 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rtp4Q9ER80 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtp4Q9ER80 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtp4Q9ER80 Gm24970-201ENSMUST00000175582 82 ntBASIC23.13■■□□□ 1.29
Rtp4Q9ER80 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtp4Q9ER80 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtp4Q9ER80 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rtp4Q9ER80 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtp4Q9ER80 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp4Q9ER80 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtp4Q9ER80 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rtp4Q9ER80 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.08■■□□□ 1.28
Rtp4Q9ER80 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp4Q9ER80 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp4Q9ER80 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp4Q9ER80 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rtp4Q9ER80 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.05■■□□□ 1.28
Rtp4Q9ER80 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rtp4Q9ER80 Amer2-203ENSMUST00000225247 2662 ntBASIC23.05■■□□□ 1.28
Rtp4Q9ER80 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.05■■□□□ 1.28
Rtp4Q9ER80 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rtp4Q9ER80 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rtp4Q9ER80 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Rtp4Q9ER80 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp4Q9ER80 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rtp4Q9ER80 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rtp4Q9ER80 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.98■■□□□ 1.27
Rtp4Q9ER80 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp4Q9ER80 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp4Q9ER80 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.96■■□□□ 1.27
Rtp4Q9ER80 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Rtp4Q9ER80 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp4Q9ER80 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp4Q9ER80 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rtp4Q9ER80 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp4Q9ER80 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp4Q9ER80 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rtp4Q9ER80 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Rtp4Q9ER80 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Rtp4Q9ER80 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rtp4Q9ER80 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.92■■□□□ 1.26
Rtp4Q9ER80 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp4Q9ER80 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rtp4Q9ER80 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.91■■□□□ 1.26
Rtp4Q9ER80 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
Rtp4Q9ER80 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Rtp4Q9ER80 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp4Q9ER80 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rtp4Q9ER80 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rtp4Q9ER80 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rtp4Q9ER80 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Rtp4Q9ER80 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtp4Q9ER80 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtp4Q9ER80 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.86■■□□□ 1.25
Rtp4Q9ER80 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtp4Q9ER80 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Rtp4Q9ER80 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.84■■□□□ 1.25
Rtp4Q9ER80 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtp4Q9ER80 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtp4Q9ER80 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Rtp4Q9ER80 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Rtp4Q9ER80 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.82■■□□□ 1.24
Rtp4Q9ER80 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rtp4Q9ER80 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rtp4Q9ER80 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.82■■□□□ 1.24
Rtp4Q9ER80 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.81■■□□□ 1.24
Rtp4Q9ER80 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtp4Q9ER80 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp4Q9ER80 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.79■■□□□ 1.24
Rtp4Q9ER80 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rtp4Q9ER80 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.79■■□□□ 1.24
Rtp4Q9ER80 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp4Q9ER80 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtp4Q9ER80 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms