Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdhb22Q91XZ8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdhb22Q91XZ8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdhb22Q91XZ8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.32■■■□□ 2.28
Pcdhb22Q91XZ8 Gm9397-201ENSMUST00000200125 605 ntBASIC29.32■■■□□ 2.28
Pcdhb22Q91XZ8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
Pcdhb22Q91XZ8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Pcdhb22Q91XZ8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pcdhb22Q91XZ8 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Pcdhb22Q91XZ8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhb22Q91XZ8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhb22Q91XZ8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhb22Q91XZ8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhb22Q91XZ8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhb22Q91XZ8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC29.22■■■□□ 2.27
Pcdhb22Q91XZ8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Pcdhb22Q91XZ8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pcdhb22Q91XZ8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pcdhb22Q91XZ8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.2■■■□□ 2.26
Pcdhb22Q91XZ8 Gm45855-201ENSMUST00000212546 880 ntBASIC29.2■■■□□ 2.26
Pcdhb22Q91XZ8 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.2■■■□□ 2.26
Pcdhb22Q91XZ8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Pcdhb22Q91XZ8 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Pcdhb22Q91XZ8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.18■■■□□ 2.26
Pcdhb22Q91XZ8 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.17■■■□□ 2.26
Pcdhb22Q91XZ8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC29.17■■■□□ 2.26
Pcdhb22Q91XZ8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pcdhb22Q91XZ8 Gm24970-201ENSMUST00000175582 82 ntBASIC29.16■■■□□ 2.26
Pcdhb22Q91XZ8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdhb22Q91XZ8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.16■■■□□ 2.26
Pcdhb22Q91XZ8 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.15■■■□□ 2.26
Pcdhb22Q91XZ8 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC29.15■■■□□ 2.26
Pcdhb22Q91XZ8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Pcdhb22Q91XZ8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.14■■■□□ 2.26
Pcdhb22Q91XZ8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pcdhb22Q91XZ8 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.14■■■□□ 2.26
Pcdhb22Q91XZ8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pcdhb22Q91XZ8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdhb22Q91XZ8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pcdhb22Q91XZ8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC29.1■■■□□ 2.25
Pcdhb22Q91XZ8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
Pcdhb22Q91XZ8 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdhb22Q91XZ8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdhb22Q91XZ8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Pcdhb22Q91XZ8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Pcdhb22Q91XZ8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.05■■■□□ 2.24
Pcdhb22Q91XZ8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Pcdhb22Q91XZ8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.04■■■□□ 2.24
Pcdhb22Q91XZ8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.03■■■□□ 2.24
Pcdhb22Q91XZ8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.03■■■□□ 2.24
Pcdhb22Q91XZ8 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.03■■■□□ 2.24
Pcdhb22Q91XZ8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Pcdhb22Q91XZ8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Pcdhb22Q91XZ8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Pcdhb22Q91XZ8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdhb22Q91XZ8 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdhb22Q91XZ8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdhb22Q91XZ8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Pcdhb22Q91XZ8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.02■■■□□ 2.24
Pcdhb22Q91XZ8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Pcdhb22Q91XZ8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
Pcdhb22Q91XZ8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Pcdhb22Q91XZ8 AC157572.2-201ENSMUST00000226970 908 ntBASIC29■■■□□ 2.23
Pcdhb22Q91XZ8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29■■■□□ 2.23
Pcdhb22Q91XZ8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Pcdhb22Q91XZ8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Pcdhb22Q91XZ8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.98■■■□□ 2.23
Pcdhb22Q91XZ8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
Pcdhb22Q91XZ8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.97■■■□□ 2.23
Pcdhb22Q91XZ8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pcdhb22Q91XZ8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Pcdhb22Q91XZ8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Pcdhb22Q91XZ8 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.96■■■□□ 2.23
Pcdhb22Q91XZ8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Pcdhb22Q91XZ8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Pcdhb22Q91XZ8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pcdhb22Q91XZ8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pcdhb22Q91XZ8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.89■■■□□ 2.22
Pcdhb22Q91XZ8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pcdhb22Q91XZ8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pcdhb22Q91XZ8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Pcdhb22Q91XZ8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pcdhb22Q91XZ8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhb22Q91XZ8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.86■■■□□ 2.21
Pcdhb22Q91XZ8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhb22Q91XZ8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhb22Q91XZ8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhb22Q91XZ8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.85■■■□□ 2.21
Pcdhb22Q91XZ8 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhb22Q91XZ8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhb22Q91XZ8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhb22Q91XZ8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdhb22Q91XZ8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pcdhb22Q91XZ8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
Pcdhb22Q91XZ8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhb22Q91XZ8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhb22Q91XZ8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Pcdhb22Q91XZ8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
Pcdhb22Q91XZ8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.8■■■□□ 2.2
Pcdhb22Q91XZ8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms