Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.16■□□□□ 0.98
Tram1Q91V04 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Tram1Q91V04 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tram1Q91V04 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tram1Q91V04 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tram1Q91V04 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tram1Q91V04 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.12■□□□□ 0.97
Tram1Q91V04 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tram1Q91V04 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tram1Q91V04 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tram1Q91V04 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tram1Q91V04 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.1■□□□□ 0.97
Tram1Q91V04 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tram1Q91V04 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.09■□□□□ 0.97
Tram1Q91V04 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tram1Q91V04 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tram1Q91V04 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tram1Q91V04 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tram1Q91V04 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Tram1Q91V04 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tram1Q91V04 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tram1Q91V04 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tram1Q91V04 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.05■□□□□ 0.96
Tram1Q91V04 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tram1Q91V04 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tram1Q91V04 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tram1Q91V04 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tram1Q91V04 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tram1Q91V04 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tram1Q91V04 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.04■□□□□ 0.96
Tram1Q91V04 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tram1Q91V04 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tram1Q91V04 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tram1Q91V04 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.02■□□□□ 0.96
Tram1Q91V04 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Tram1Q91V04 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tram1Q91V04 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tram1Q91V04 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tram1Q91V04 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tram1Q91V04 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Tram1Q91V04 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tram1Q91V04 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tram1Q91V04 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tram1Q91V04 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tram1Q91V04 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tram1Q91V04 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.97■□□□□ 0.95
Tram1Q91V04 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tram1Q91V04 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.97■□□□□ 0.95
Tram1Q91V04 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tram1Q91V04 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tram1Q91V04 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tram1Q91V04 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Tram1Q91V04 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Tram1Q91V04 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tram1Q91V04 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tram1Q91V04 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tram1Q91V04 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tram1Q91V04 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.92■□□□□ 0.94
Tram1Q91V04 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tram1Q91V04 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Tram1Q91V04 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tram1Q91V04 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tram1Q91V04 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tram1Q91V04 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tram1Q91V04 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tram1Q91V04 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tram1Q91V04 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Tram1Q91V04 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Tram1Q91V04 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tram1Q91V04 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tram1Q91V04 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tram1Q91V04 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tram1Q91V04 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tram1Q91V04 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tram1Q91V04 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Tram1Q91V04 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tram1Q91V04 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tram1Q91V04 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tram1Q91V04 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tram1Q91V04 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Tram1Q91V04 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tram1Q91V04 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tram1Q91V04 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tram1Q91V04 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tram1Q91V04 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tram1Q91V04 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Tram1Q91V04 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Tram1Q91V04 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tram1Q91V04 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tram1Q91V04 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tram1Q91V04 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Tram1Q91V04 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Tram1Q91V04 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tram1Q91V04 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tram1Q91V04 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tram1Q91V04 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.79■□□□□ 0.92
Tram1Q91V04 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tram1Q91V04 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tram1Q91V04 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tram1Q91V04 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms