Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc30Q8BVF4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc30Q8BVF4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Ccdc30Q8BVF4 Zfp131-205ENSMUST00000223812 663 ntBASIC32.41■■■□□ 2.78
Ccdc30Q8BVF4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Ccdc30Q8BVF4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
Ccdc30Q8BVF4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc30Q8BVF4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC32.36■■■□□ 2.77
Ccdc30Q8BVF4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccdc30Q8BVF4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccdc30Q8BVF4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc30Q8BVF4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc30Q8BVF4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ccdc30Q8BVF4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Ccdc30Q8BVF4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.32■■■□□ 2.76
Ccdc30Q8BVF4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc30Q8BVF4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Ccdc30Q8BVF4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC32.31■■■□□ 2.76
Ccdc30Q8BVF4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Ccdc30Q8BVF4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ccdc30Q8BVF4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Ccdc30Q8BVF4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Ccdc30Q8BVF4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC32.27■■■□□ 2.76
Ccdc30Q8BVF4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC32.27■■■□□ 2.76
Ccdc30Q8BVF4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
Ccdc30Q8BVF4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC32.26■■■□□ 2.75
Ccdc30Q8BVF4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC32.26■■■□□ 2.75
Ccdc30Q8BVF4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Ccdc30Q8BVF4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC32.25■■■□□ 2.75
Ccdc30Q8BVF4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc30Q8BVF4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC32.24■■■□□ 2.75
Ccdc30Q8BVF4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Ccdc30Q8BVF4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Ccdc30Q8BVF4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
Ccdc30Q8BVF4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC32.21■■■□□ 2.75
Ccdc30Q8BVF4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Ccdc30Q8BVF4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
Ccdc30Q8BVF4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ccdc30Q8BVF4 Amer2-203ENSMUST00000225247 2662 ntBASIC32.19■■■□□ 2.74
Ccdc30Q8BVF4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Ccdc30Q8BVF4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC32.18■■■□□ 2.74
Ccdc30Q8BVF4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC32.17■■■□□ 2.74
Ccdc30Q8BVF4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc30Q8BVF4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC32.17■■■□□ 2.74
Ccdc30Q8BVF4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Ccdc30Q8BVF4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC32.16■■■□□ 2.74
Ccdc30Q8BVF4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Ccdc30Q8BVF4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Ccdc30Q8BVF4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ccdc30Q8BVF4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ccdc30Q8BVF4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ccdc30Q8BVF4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccdc30Q8BVF4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccdc30Q8BVF4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Ccdc30Q8BVF4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ccdc30Q8BVF4 Tdp2-203ENSMUST00000223804 1136 ntBASIC32.07■■■□□ 2.72
Ccdc30Q8BVF4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ccdc30Q8BVF4 Gm9397-201ENSMUST00000200125 605 ntBASIC32.05■■■□□ 2.72
Ccdc30Q8BVF4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ccdc30Q8BVF4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ccdc30Q8BVF4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ccdc30Q8BVF4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC32.02■■■□□ 2.72
Ccdc30Q8BVF4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC32.01■■■□□ 2.71
Ccdc30Q8BVF4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC32■■■□□ 2.71
Ccdc30Q8BVF4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ccdc30Q8BVF4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc30Q8BVF4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Ccdc30Q8BVF4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ccdc30Q8BVF4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc30Q8BVF4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc30Q8BVF4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccdc30Q8BVF4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC31.97■■■□□ 2.71
Ccdc30Q8BVF4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccdc30Q8BVF4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
Ccdc30Q8BVF4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Ccdc30Q8BVF4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.96■■■□□ 2.71
Ccdc30Q8BVF4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ccdc30Q8BVF4 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.94■■■□□ 2.7
Ccdc30Q8BVF4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
Ccdc30Q8BVF4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.93■■■□□ 2.7
Ccdc30Q8BVF4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.93■■■□□ 2.7
Ccdc30Q8BVF4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Ccdc30Q8BVF4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc30Q8BVF4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
Ccdc30Q8BVF4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc30Q8BVF4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ccdc30Q8BVF4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.91■■■□□ 2.7
Ccdc30Q8BVF4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Ccdc30Q8BVF4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ccdc30Q8BVF4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ccdc30Q8BVF4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.89■■■□□ 2.7
Ccdc30Q8BVF4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.88■■■□□ 2.69
Ccdc30Q8BVF4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc30Q8BVF4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc30Q8BVF4 Gm45855-201ENSMUST00000212546 880 ntBASIC31.87■■■□□ 2.69
Ccdc30Q8BVF4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ccdc30Q8BVF4 Gm24970-201ENSMUST00000175582 82 ntBASIC31.86■■■□□ 2.69
Ccdc30Q8BVF4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ccdc30Q8BVF4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ccdc30Q8BVF4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms