Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29,01■■■□□ 2,23
VmacQ8BP01 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,23
VmacQ8BP01 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28,99■■■□□ 2,23
VmacQ8BP01 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28,99■■■□□ 2,23
VmacQ8BP01 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28,98■■■□□ 2,23
VmacQ8BP01 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28,98■■■□□ 2,23
VmacQ8BP01 Gm43445-201ENSMUST00000198564 2091 ntBASIC28,98■■■□□ 2,23
VmacQ8BP01 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC28,98■■■□□ 2,23
VmacQ8BP01 Tdp2-203ENSMUST00000223804 1136 ntBASIC28,95■■■□□ 2,22
VmacQ8BP01 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28,95■■■□□ 2,22
VmacQ8BP01 Gm6206-201ENSMUST00000133472 2199 ntBASIC28,95■■■□□ 2,22
VmacQ8BP01 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28,94■■■□□ 2,22
VmacQ8BP01 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28,94■■■□□ 2,22
VmacQ8BP01 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
VmacQ8BP01 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28,92■■■□□ 2,22
VmacQ8BP01 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28,91■■■□□ 2,22
VmacQ8BP01 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28,91■■■□□ 2,22
VmacQ8BP01 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28,89■■■□□ 2,22
VmacQ8BP01 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28,88■■■□□ 2,21
VmacQ8BP01 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28,87■■■□□ 2,21
VmacQ8BP01 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28,87■■■□□ 2,21
VmacQ8BP01 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28,86■■■□□ 2,21
VmacQ8BP01 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC28,85■■■□□ 2,21
VmacQ8BP01 Gm9397-201ENSMUST00000200125 605 ntBASIC28,85■■■□□ 2,21
VmacQ8BP01 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28,84■■■□□ 2,21
VmacQ8BP01 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,21
VmacQ8BP01 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28,83■■■□□ 2,2
VmacQ8BP01 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28,81■■■□□ 2,2
VmacQ8BP01 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28,8■■■□□ 2,2
VmacQ8BP01 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28,79■■■□□ 2,2
VmacQ8BP01 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28,79■■■□□ 2,2
VmacQ8BP01 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28,78■■■□□ 2,2
VmacQ8BP01 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28,77■■■□□ 2,2
VmacQ8BP01 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28,77■■■□□ 2,2
VmacQ8BP01 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28,76■■■□□ 2,2
VmacQ8BP01 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28,76■■■□□ 2,19
VmacQ8BP01 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28,75■■■□□ 2,19
VmacQ8BP01 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28,74■■■□□ 2,19
VmacQ8BP01 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28,74■■■□□ 2,19
VmacQ8BP01 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28,73■■■□□ 2,19
VmacQ8BP01 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28,73■■■□□ 2,19
VmacQ8BP01 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28,72■■■□□ 2,19
VmacQ8BP01 Gm24970-201ENSMUST00000175582 82 ntBASIC28,72■■■□□ 2,19
VmacQ8BP01 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28,72■■■□□ 2,19
VmacQ8BP01 Gm43863-201ENSMUST00000203822 1192 ntBASIC28,72■■■□□ 2,19
VmacQ8BP01 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28,71■■■□□ 2,19
VmacQ8BP01 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28,7■■■□□ 2,18
VmacQ8BP01 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28,7■■■□□ 2,18
VmacQ8BP01 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28,69■■■□□ 2,18
VmacQ8BP01 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28,69■■■□□ 2,18
VmacQ8BP01 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28,69■■■□□ 2,18
VmacQ8BP01 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28,68■■■□□ 2,18
VmacQ8BP01 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28,67■■■□□ 2,18
VmacQ8BP01 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28,67■■■□□ 2,18
VmacQ8BP01 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28,67■■■□□ 2,18
VmacQ8BP01 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28,66■■■□□ 2,18
VmacQ8BP01 Gm45855-201ENSMUST00000212546 880 ntBASIC28,66■■■□□ 2,18
VmacQ8BP01 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
VmacQ8BP01 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28,66■■■□□ 2,18
VmacQ8BP01 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28,65■■■□□ 2,18
VmacQ8BP01 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
VmacQ8BP01 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28,65■■■□□ 2,18
VmacQ8BP01 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28,63■■■□□ 2,17
VmacQ8BP01 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28,63■■■□□ 2,17
VmacQ8BP01 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28,63■■■□□ 2,17
VmacQ8BP01 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28,62■■■□□ 2,17
VmacQ8BP01 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28,61■■■□□ 2,17
VmacQ8BP01 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28,61■■■□□ 2,17
VmacQ8BP01 AC157572.2-201ENSMUST00000226970 908 ntBASIC28,59■■■□□ 2,17
VmacQ8BP01 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28,59■■■□□ 2,17
VmacQ8BP01 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
VmacQ8BP01 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28,57■■■□□ 2,16
VmacQ8BP01 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28,56■■■□□ 2,16
VmacQ8BP01 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28,56■■■□□ 2,16
VmacQ8BP01 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28,55■■■□□ 2,16
VmacQ8BP01 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
VmacQ8BP01 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28,54■■■□□ 2,16
VmacQ8BP01 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
VmacQ8BP01 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28,54■■■□□ 2,16
VmacQ8BP01 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28,54■■■□□ 2,16
VmacQ8BP01 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28,53■■■□□ 2,16
VmacQ8BP01 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28,52■■■□□ 2,16
VmacQ8BP01 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28,52■■■□□ 2,16
VmacQ8BP01 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28,52■■■□□ 2,16
VmacQ8BP01 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28,51■■■□□ 2,15
VmacQ8BP01 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28,5■■■□□ 2,15
VmacQ8BP01 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28,49■■■□□ 2,15
VmacQ8BP01 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28,49■■■□□ 2,15
VmacQ8BP01 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28,48■■■□□ 2,15
VmacQ8BP01 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28,48■■■□□ 2,15
VmacQ8BP01 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
VmacQ8BP01 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
VmacQ8BP01 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28,48■■■□□ 2,15
VmacQ8BP01 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28,47■■■□□ 2,15
VmacQ8BP01 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28,46■■■□□ 2,15
VmacQ8BP01 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,15
VmacQ8BP01 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28,45■■■□□ 2,15
VmacQ8BP01 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28,44■■■□□ 2,14
VmacQ8BP01 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28,44■■■□□ 2,14
VmacQ8BP01 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28,44■■■□□ 2,14
Retrieved 100 of 76,532 protein–RNA pairs in 40,7 ms