Protein–RNA interactions for Protein: Q80UY2

Kcmf1, E3 ubiquitin-protein ligase KCMF1, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcmf1Q80UY2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Kcmf1Q80UY2 Gm9397-201ENSMUST00000200125 605 ntBASIC23.43■■□□□ 1.34
Kcmf1Q80UY2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Kcmf1Q80UY2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Kcmf1Q80UY2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Kcmf1Q80UY2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.4■■□□□ 1.34
Kcmf1Q80UY2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Kcmf1Q80UY2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Kcmf1Q80UY2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Kcmf1Q80UY2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Kcmf1Q80UY2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Kcmf1Q80UY2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Kcmf1Q80UY2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Kcmf1Q80UY2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Kcmf1Q80UY2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kcmf1Q80UY2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kcmf1Q80UY2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Kcmf1Q80UY2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.35■■□□□ 1.33
Kcmf1Q80UY2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Kcmf1Q80UY2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Kcmf1Q80UY2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Kcmf1Q80UY2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Kcmf1Q80UY2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.33■■□□□ 1.33
Kcmf1Q80UY2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.33■■□□□ 1.33
Kcmf1Q80UY2 Gm45855-201ENSMUST00000212546 880 ntBASIC23.33■■□□□ 1.33
Kcmf1Q80UY2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.33■■□□□ 1.32
Kcmf1Q80UY2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Kcmf1Q80UY2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.33■■□□□ 1.32
Kcmf1Q80UY2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Kcmf1Q80UY2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
Kcmf1Q80UY2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.3■■□□□ 1.32
Kcmf1Q80UY2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.29■■□□□ 1.32
Kcmf1Q80UY2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Kcmf1Q80UY2 Gm24970-201ENSMUST00000175582 82 ntBASIC23.28■■□□□ 1.32
Kcmf1Q80UY2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.28■■□□□ 1.32
Kcmf1Q80UY2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Kcmf1Q80UY2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Kcmf1Q80UY2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kcmf1Q80UY2 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.27■■□□□ 1.32
Kcmf1Q80UY2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Kcmf1Q80UY2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Kcmf1Q80UY2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Kcmf1Q80UY2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Kcmf1Q80UY2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Kcmf1Q80UY2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.24■■□□□ 1.31
Kcmf1Q80UY2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.24■■□□□ 1.31
Kcmf1Q80UY2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Kcmf1Q80UY2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Kcmf1Q80UY2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Kcmf1Q80UY2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Kcmf1Q80UY2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.22■■□□□ 1.31
Kcmf1Q80UY2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcmf1Q80UY2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Kcmf1Q80UY2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Kcmf1Q80UY2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.21■■□□□ 1.31
Kcmf1Q80UY2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Kcmf1Q80UY2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Kcmf1Q80UY2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Kcmf1Q80UY2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Kcmf1Q80UY2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.19■■□□□ 1.3
Kcmf1Q80UY2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcmf1Q80UY2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.18■■□□□ 1.3
Kcmf1Q80UY2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Kcmf1Q80UY2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.18■■□□□ 1.3
Kcmf1Q80UY2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.18■■□□□ 1.3
Kcmf1Q80UY2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Kcmf1Q80UY2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Kcmf1Q80UY2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Kcmf1Q80UY2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Kcmf1Q80UY2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
Kcmf1Q80UY2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kcmf1Q80UY2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Kcmf1Q80UY2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.15■■□□□ 1.3
Kcmf1Q80UY2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Kcmf1Q80UY2 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.14■■□□□ 1.29
Kcmf1Q80UY2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.13■■□□□ 1.29
Kcmf1Q80UY2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Kcmf1Q80UY2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Kcmf1Q80UY2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Kcmf1Q80UY2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.09■■□□□ 1.29
Kcmf1Q80UY2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kcmf1Q80UY2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Kcmf1Q80UY2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Kcmf1Q80UY2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Kcmf1Q80UY2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Kcmf1Q80UY2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Kcmf1Q80UY2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.08■■□□□ 1.29
Kcmf1Q80UY2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Kcmf1Q80UY2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Kcmf1Q80UY2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Kcmf1Q80UY2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Kcmf1Q80UY2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Kcmf1Q80UY2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.05■■□□□ 1.28
Kcmf1Q80UY2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Kcmf1Q80UY2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Kcmf1Q80UY2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Kcmf1Q80UY2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Kcmf1Q80UY2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Kcmf1Q80UY2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Kcmf1Q80UY2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms