Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rnf20Q5DTM8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rnf20Q5DTM8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC29.56■■■□□ 2.32
Rnf20Q5DTM8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Rnf20Q5DTM8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
Rnf20Q5DTM8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC29.54■■■□□ 2.32
Rnf20Q5DTM8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.53■■■□□ 2.32
Rnf20Q5DTM8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rnf20Q5DTM8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Rnf20Q5DTM8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rnf20Q5DTM8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rnf20Q5DTM8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rnf20Q5DTM8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Rnf20Q5DTM8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.5■■■□□ 2.31
Rnf20Q5DTM8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rnf20Q5DTM8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Rnf20Q5DTM8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Rnf20Q5DTM8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Rnf20Q5DTM8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.48■■■□□ 2.31
Rnf20Q5DTM8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.48■■■□□ 2.31
Rnf20Q5DTM8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rnf20Q5DTM8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Rnf20Q5DTM8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.47■■■□□ 2.31
Rnf20Q5DTM8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Rnf20Q5DTM8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
Rnf20Q5DTM8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Rnf20Q5DTM8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rnf20Q5DTM8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Rnf20Q5DTM8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.43■■■□□ 2.3
Rnf20Q5DTM8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rnf20Q5DTM8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
Rnf20Q5DTM8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rnf20Q5DTM8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rnf20Q5DTM8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rnf20Q5DTM8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Rnf20Q5DTM8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.38■■■□□ 2.29
Rnf20Q5DTM8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rnf20Q5DTM8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rnf20Q5DTM8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Rnf20Q5DTM8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rnf20Q5DTM8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.36■■■□□ 2.29
Rnf20Q5DTM8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.35■■■□□ 2.29
Rnf20Q5DTM8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rnf20Q5DTM8 Zfp131-205ENSMUST00000223812 663 ntBASIC29.34■■■□□ 2.29
Rnf20Q5DTM8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC29.33■■■□□ 2.29
Rnf20Q5DTM8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Rnf20Q5DTM8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rnf20Q5DTM8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Rnf20Q5DTM8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rnf20Q5DTM8 Amer2-203ENSMUST00000225247 2662 ntBASIC29.29■■■□□ 2.28
Rnf20Q5DTM8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rnf20Q5DTM8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rnf20Q5DTM8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Rnf20Q5DTM8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Rnf20Q5DTM8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Rnf20Q5DTM8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC29.24■■■□□ 2.27
Rnf20Q5DTM8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rnf20Q5DTM8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rnf20Q5DTM8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC29.23■■■□□ 2.27
Rnf20Q5DTM8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC29.22■■■□□ 2.27
Rnf20Q5DTM8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Rnf20Q5DTM8 Tdp2-203ENSMUST00000223804 1136 ntBASIC29.2■■■□□ 2.26
Rnf20Q5DTM8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rnf20Q5DTM8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rnf20Q5DTM8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rnf20Q5DTM8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.18■■■□□ 2.26
Rnf20Q5DTM8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Rnf20Q5DTM8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Rnf20Q5DTM8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rnf20Q5DTM8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rnf20Q5DTM8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rnf20Q5DTM8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.15■■■□□ 2.26
Rnf20Q5DTM8 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Rnf20Q5DTM8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rnf20Q5DTM8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC29.14■■■□□ 2.26
Rnf20Q5DTM8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC29.12■■■□□ 2.25
Rnf20Q5DTM8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rnf20Q5DTM8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rnf20Q5DTM8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rnf20Q5DTM8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rnf20Q5DTM8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rnf20Q5DTM8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Rnf20Q5DTM8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rnf20Q5DTM8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
Rnf20Q5DTM8 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.1■■■□□ 2.25
Rnf20Q5DTM8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Rnf20Q5DTM8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Rnf20Q5DTM8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Rnf20Q5DTM8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Rnf20Q5DTM8 Gm9397-201ENSMUST00000200125 605 ntBASIC29.09■■■□□ 2.25
Rnf20Q5DTM8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
Rnf20Q5DTM8 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.08■■■□□ 2.25
Rnf20Q5DTM8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.07■■■□□ 2.24
Rnf20Q5DTM8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rnf20Q5DTM8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rnf20Q5DTM8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Rnf20Q5DTM8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC29.05■■■□□ 2.24
Rnf20Q5DTM8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Rnf20Q5DTM8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
Rnf20Q5DTM8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms