Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Trim43cP86449 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Trim43cP86449 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Trim43cP86449 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.28■■□□□ 1.96
Trim43cP86449 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.27■■□□□ 1.96
Trim43cP86449 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Trim43cP86449 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Trim43cP86449 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Trim43cP86449 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Trim43cP86449 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Trim43cP86449 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Trim43cP86449 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim43cP86449 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.23■■□□□ 1.95
Trim43cP86449 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim43cP86449 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Trim43cP86449 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Trim43cP86449 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Trim43cP86449 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Trim43cP86449 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Trim43cP86449 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.2■■□□□ 1.95
Trim43cP86449 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.2■■□□□ 1.94
Trim43cP86449 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.19■■□□□ 1.94
Trim43cP86449 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Trim43cP86449 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.16■■□□□ 1.94
Trim43cP86449 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
Trim43cP86449 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Trim43cP86449 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim43cP86449 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Trim43cP86449 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.15■■□□□ 1.94
Trim43cP86449 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.13■■□□□ 1.93
Trim43cP86449 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trim43cP86449 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trim43cP86449 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Trim43cP86449 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.12■■□□□ 1.93
Trim43cP86449 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Trim43cP86449 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Trim43cP86449 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.11■■□□□ 1.93
Trim43cP86449 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Trim43cP86449 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
Trim43cP86449 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.1■■□□□ 1.93
Trim43cP86449 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
Trim43cP86449 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.09■■□□□ 1.93
Trim43cP86449 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Trim43cP86449 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Trim43cP86449 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.05■■□□□ 1.92
Trim43cP86449 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim43cP86449 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Trim43cP86449 Gm9397-201ENSMUST00000200125 605 ntBASIC27.04■■□□□ 1.92
Trim43cP86449 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Trim43cP86449 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Trim43cP86449 Amer2-203ENSMUST00000225247 2662 ntBASIC27.03■■□□□ 1.92
Trim43cP86449 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim43cP86449 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Trim43cP86449 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Trim43cP86449 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Trim43cP86449 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Trim43cP86449 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Trim43cP86449 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Trim43cP86449 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.99■■□□□ 1.91
Trim43cP86449 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Trim43cP86449 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Trim43cP86449 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Trim43cP86449 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Trim43cP86449 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
Trim43cP86449 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Trim43cP86449 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.94■■□□□ 1.9
Trim43cP86449 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
Trim43cP86449 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Trim43cP86449 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
Trim43cP86449 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.93■■□□□ 1.9
Trim43cP86449 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim43cP86449 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.92■■□□□ 1.9
Trim43cP86449 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.92■■□□□ 1.9
Trim43cP86449 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim43cP86449 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Trim43cP86449 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Trim43cP86449 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.91■■□□□ 1.9
Trim43cP86449 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.9■■□□□ 1.9
Trim43cP86449 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.9■■□□□ 1.9
Trim43cP86449 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.9■■□□□ 1.9
Trim43cP86449 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim43cP86449 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Trim43cP86449 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim43cP86449 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Trim43cP86449 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.89■■□□□ 1.9
Trim43cP86449 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.89■■□□□ 1.9
Trim43cP86449 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
Trim43cP86449 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Trim43cP86449 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
Trim43cP86449 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Trim43cP86449 Gm24970-201ENSMUST00000175582 82 ntBASIC26.87■■□□□ 1.89
Trim43cP86449 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.86■■□□□ 1.89
Trim43cP86449 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Trim43cP86449 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Trim43cP86449 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Trim43cP86449 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Trim43cP86449 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
Trim43cP86449 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
Trim43cP86449 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Trim43cP86449 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.81■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 107.1 ms