Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm6P62313 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Lsm6P62313 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.77■■□□□ 1.08
Lsm6P62313 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Lsm6P62313 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Lsm6P62313 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm6P62313 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm6P62313 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm6P62313 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm6P62313 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.74■■□□□ 1.07
Lsm6P62313 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm6P62313 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.74■■□□□ 1.07
Lsm6P62313 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Lsm6P62313 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm6P62313 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Lsm6P62313 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm6P62313 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm6P62313 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm6P62313 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm6P62313 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm6P62313 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm6P62313 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.69■■□□□ 1.06
Lsm6P62313 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.69■■□□□ 1.06
Lsm6P62313 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm6P62313 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm6P62313 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.68■■□□□ 1.06
Lsm6P62313 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm6P62313 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm6P62313 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm6P62313 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm6P62313 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm6P62313 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.65■■□□□ 1.06
Lsm6P62313 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm6P62313 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Lsm6P62313 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm6P62313 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm6P62313 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm6P62313 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm6P62313 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.63■■□□□ 1.05
Lsm6P62313 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm6P62313 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm6P62313 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
Lsm6P62313 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lsm6P62313 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm6P62313 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm6P62313 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm6P62313 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lsm6P62313 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lsm6P62313 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm6P62313 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Lsm6P62313 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm6P62313 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm6P62313 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm6P62313 Amer2-203ENSMUST00000225247 2662 ntBASIC21.54■■□□□ 1.04
Lsm6P62313 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.54■■□□□ 1.04
Lsm6P62313 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Lsm6P62313 Zfp131-205ENSMUST00000223812 663 ntBASIC21.53■■□□□ 1.04
Lsm6P62313 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Lsm6P62313 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm6P62313 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.53■■□□□ 1.04
Lsm6P62313 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm6P62313 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lsm6P62313 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm6P62313 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Lsm6P62313 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm6P62313 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.5■■□□□ 1.03
Lsm6P62313 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm6P62313 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm6P62313 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.48■■□□□ 1.03
Lsm6P62313 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm6P62313 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Lsm6P62313 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm6P62313 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm6P62313 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm6P62313 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm6P62313 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.46■■□□□ 1.03
Lsm6P62313 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.45■■□□□ 1.02
Lsm6P62313 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm6P62313 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.44■■□□□ 1.02
Lsm6P62313 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm6P62313 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm6P62313 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm6P62313 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lsm6P62313 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm6P62313 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.42■■□□□ 1.02
Lsm6P62313 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm6P62313 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm6P62313 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm6P62313 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm6P62313 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm6P62313 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm6P62313 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Lsm6P62313 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.39■■□□□ 1.02
Lsm6P62313 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm6P62313 Gm9397-201ENSMUST00000200125 605 ntBASIC21.39■■□□□ 1.01
Lsm6P62313 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms