Protein–RNA interactions for Protein: O88574

Sap30, Histone deacetylase complex subunit SAP30, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sap30O88574 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sap30O88574 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Sap30O88574 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sap30O88574 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sap30O88574 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sap30O88574 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sap30O88574 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.96■□□□□ 0.63
Sap30O88574 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sap30O88574 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sap30O88574 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sap30O88574 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sap30O88574 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sap30O88574 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sap30O88574 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sap30O88574 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sap30O88574 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sap30O88574 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sap30O88574 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.89■□□□□ 0.61
Sap30O88574 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sap30O88574 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sap30O88574 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sap30O88574 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sap30O88574 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.86■□□□□ 0.61
Sap30O88574 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sap30O88574 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.86■□□□□ 0.61
Sap30O88574 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sap30O88574 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sap30O88574 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.85■□□□□ 0.61
Sap30O88574 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.85■□□□□ 0.61
Sap30O88574 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sap30O88574 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Sap30O88574 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sap30O88574 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sap30O88574 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sap30O88574 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.83■□□□□ 0.6
Sap30O88574 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.83■□□□□ 0.6
Sap30O88574 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sap30O88574 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sap30O88574 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sap30O88574 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sap30O88574 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sap30O88574 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sap30O88574 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sap30O88574 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.81■□□□□ 0.6
Sap30O88574 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sap30O88574 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sap30O88574 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sap30O88574 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.79■□□□□ 0.6
Sap30O88574 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sap30O88574 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sap30O88574 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sap30O88574 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sap30O88574 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.77■□□□□ 0.6
Sap30O88574 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sap30O88574 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sap30O88574 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sap30O88574 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Sap30O88574 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.74■□□□□ 0.59
Sap30O88574 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sap30O88574 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.73■□□□□ 0.59
Sap30O88574 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sap30O88574 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sap30O88574 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sap30O88574 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.7■□□□□ 0.58
Sap30O88574 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Sap30O88574 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sap30O88574 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sap30O88574 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sap30O88574 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sap30O88574 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sap30O88574 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sap30O88574 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Sap30O88574 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sap30O88574 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
Sap30O88574 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sap30O88574 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sap30O88574 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sap30O88574 Gm6821-201ENSMUST00000107540 542 ntBASIC18.66■□□□□ 0.58
Sap30O88574 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sap30O88574 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sap30O88574 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sap30O88574 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sap30O88574 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sap30O88574 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sap30O88574 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Sap30O88574 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sap30O88574 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sap30O88574 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.64■□□□□ 0.57
Sap30O88574 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sap30O88574 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sap30O88574 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Sap30O88574 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sap30O88574 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sap30O88574 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sap30O88574 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sap30O88574 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sap30O88574 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sap30O88574 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sap30O88574 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sap30O88574 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms