Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC34.1■■■■□ 3.05
Cntnap1O54991 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Cntnap1O54991 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Cntnap1O54991 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC34.08■■■■□ 3.05
Cntnap1O54991 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC34.06■■■■□ 3.04
Cntnap1O54991 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC34.06■■■■□ 3.04
Cntnap1O54991 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC34.05■■■■□ 3.04
Cntnap1O54991 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Cntnap1O54991 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC34.05■■■■□ 3.04
Cntnap1O54991 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Cntnap1O54991 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Cntnap1O54991 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC34.01■■■■□ 3.04
Cntnap1O54991 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC34■■■■□ 3.03
Cntnap1O54991 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC33.99■■■■□ 3.03
Cntnap1O54991 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Cntnap1O54991 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC33.96■■■■□ 3.03
Cntnap1O54991 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
Cntnap1O54991 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
Cntnap1O54991 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Cntnap1O54991 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC33.93■■■■□ 3.02
Cntnap1O54991 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC33.93■■■■□ 3.02
Cntnap1O54991 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC33.91■■■■□ 3.02
Cntnap1O54991 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC33.89■■■■□ 3.02
Cntnap1O54991 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC33.89■■■■□ 3.02
Cntnap1O54991 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC33.87■■■■□ 3.01
Cntnap1O54991 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Cntnap1O54991 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Cntnap1O54991 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
Cntnap1O54991 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
Cntnap1O54991 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC33.84■■■■□ 3.01
Cntnap1O54991 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
Cntnap1O54991 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC33.82■■■■□ 3
Cntnap1O54991 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Cntnap1O54991 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC33.81■■■■□ 3
Cntnap1O54991 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Cntnap1O54991 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC33.76■■■■□ 3
Cntnap1O54991 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Cntnap1O54991 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC33.74■■■□□ 2.99
Cntnap1O54991 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC33.74■■■□□ 2.99
Cntnap1O54991 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Cntnap1O54991 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Cntnap1O54991 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC33.72■■■□□ 2.99
Cntnap1O54991 Gm6311-201ENSMUST00000073790 878 ntBASIC33.72■■■□□ 2.99
Cntnap1O54991 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC33.72■■■□□ 2.99
Cntnap1O54991 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC33.71■■■□□ 2.99
Cntnap1O54991 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC33.71■■■□□ 2.99
Cntnap1O54991 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC33.71■■■□□ 2.99
Cntnap1O54991 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Cntnap1O54991 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
Cntnap1O54991 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC33.7■■■□□ 2.98
Cntnap1O54991 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Cntnap1O54991 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Cntnap1O54991 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Cntnap1O54991 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Cntnap1O54991 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Cntnap1O54991 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC33.66■■■□□ 2.98
Cntnap1O54991 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC33.65■■■□□ 2.98
Cntnap1O54991 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC33.65■■■□□ 2.98
Cntnap1O54991 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
Cntnap1O54991 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
Cntnap1O54991 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Cntnap1O54991 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC33.63■■■□□ 2.97
Cntnap1O54991 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC33.62■■■□□ 2.97
Cntnap1O54991 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Cntnap1O54991 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC33.6■■■□□ 2.97
Cntnap1O54991 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Cntnap1O54991 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC33.59■■■□□ 2.97
Cntnap1O54991 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
Cntnap1O54991 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC33.57■■■□□ 2.96
Cntnap1O54991 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC33.57■■■□□ 2.96
Cntnap1O54991 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Cntnap1O54991 AC167019.3-201ENSMUST00000228225 1266 ntBASIC33.56■■■□□ 2.96
Cntnap1O54991 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Cntnap1O54991 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.54■■■□□ 2.96
Cntnap1O54991 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC33.54■■■□□ 2.96
Cntnap1O54991 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Cntnap1O54991 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC33.53■■■□□ 2.96
Cntnap1O54991 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC33.53■■■□□ 2.96
Cntnap1O54991 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Cntnap1O54991 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
Cntnap1O54991 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Cntnap1O54991 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
Cntnap1O54991 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC33.52■■■□□ 2.96
Cntnap1O54991 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC33.5■■■□□ 2.95
Cntnap1O54991 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
Cntnap1O54991 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC33.5■■■□□ 2.95
Cntnap1O54991 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
Cntnap1O54991 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC33.49■■■□□ 2.95
Cntnap1O54991 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Cntnap1O54991 AC131739.1-201ENSMUST00000221692 1245 ntBASIC33.48■■■□□ 2.95
Cntnap1O54991 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Cntnap1O54991 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Cntnap1O54991 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Cntnap1O54991 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Cntnap1O54991 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
Cntnap1O54991 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
Cntnap1O54991 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Cntnap1O54991 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC33.43■■■□□ 2.94
Cntnap1O54991 Gm12366-201ENSMUST00000121722 873 ntBASIC33.43■■■□□ 2.94
Cntnap1O54991 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC33.43■■■□□ 2.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms