Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.98■■□□□ 1.11
Raet1bO08603 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Raet1bO08603 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Raet1bO08603 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Raet1bO08603 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.97■■□□□ 1.11
Raet1bO08603 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Raet1bO08603 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Raet1bO08603 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Raet1bO08603 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Raet1bO08603 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Raet1bO08603 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Raet1bO08603 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Raet1bO08603 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Raet1bO08603 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Raet1bO08603 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Raet1bO08603 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Raet1bO08603 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Raet1bO08603 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Raet1bO08603 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Raet1bO08603 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Raet1bO08603 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.92■■□□□ 1.1
Raet1bO08603 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Raet1bO08603 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.91■■□□□ 1.1
Raet1bO08603 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Raet1bO08603 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Raet1bO08603 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Raet1bO08603 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Raet1bO08603 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Raet1bO08603 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Raet1bO08603 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.87■■□□□ 1.09
Raet1bO08603 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
Raet1bO08603 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Raet1bO08603 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Raet1bO08603 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.86■■□□□ 1.09
Raet1bO08603 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Raet1bO08603 Zfp131-205ENSMUST00000223812 663 ntBASIC21.85■■□□□ 1.09
Raet1bO08603 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Raet1bO08603 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.84■■□□□ 1.09
Raet1bO08603 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Raet1bO08603 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Raet1bO08603 Amer2-203ENSMUST00000225247 2662 ntBASIC21.83■■□□□ 1.09
Raet1bO08603 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Raet1bO08603 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Raet1bO08603 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Raet1bO08603 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.82■■□□□ 1.08
Raet1bO08603 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Raet1bO08603 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Raet1bO08603 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Raet1bO08603 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Raet1bO08603 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Raet1bO08603 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Raet1bO08603 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Raet1bO08603 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.76■■□□□ 1.07
Raet1bO08603 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Raet1bO08603 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raet1bO08603 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Raet1bO08603 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raet1bO08603 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.74■■□□□ 1.07
Raet1bO08603 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Raet1bO08603 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Raet1bO08603 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Raet1bO08603 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Raet1bO08603 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Raet1bO08603 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Raet1bO08603 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Raet1bO08603 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Raet1bO08603 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Raet1bO08603 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.7■■□□□ 1.06
Raet1bO08603 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.69■■□□□ 1.06
Raet1bO08603 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Raet1bO08603 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Raet1bO08603 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Raet1bO08603 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Raet1bO08603 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1bO08603 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1bO08603 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1bO08603 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.68■■□□□ 1.06
Raet1bO08603 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.68■■□□□ 1.06
Raet1bO08603 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1bO08603 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Raet1bO08603 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Raet1bO08603 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Raet1bO08603 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Raet1bO08603 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.66■■□□□ 1.06
Raet1bO08603 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.65■■□□□ 1.06
Raet1bO08603 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Raet1bO08603 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Raet1bO08603 Gm9397-201ENSMUST00000200125 605 ntBASIC21.65■■□□□ 1.06
Raet1bO08603 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Raet1bO08603 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Raet1bO08603 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Raet1bO08603 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Raet1bO08603 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Raet1bO08603 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.63■■□□□ 1.05
Raet1bO08603 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.63■■□□□ 1.05
Raet1bO08603 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Raet1bO08603 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Raet1bO08603 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.62■■□□□ 1.05
Raet1bO08603 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Raet1bO08603 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms