Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.47■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tcrg-V4A0A0B4J1J8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tcrg-V4A0A0B4J1J8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.37■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.35■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tcrg-V4A0A0B4J1J8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.33■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.31■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.31■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.27■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.27■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tcrg-V4A0A0B4J1J8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Gm27325-201ENSMUST00000175467 74 ntBASIC18.24■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.24■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tcrg-V4A0A0B4J1J8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tcrg-V4A0A0B4J1J8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms