Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm18699-201ENSMUST00000190713 243 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm8058-201ENSMUST00000217247 587 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm9575-201ENSMUST00000122140 1339 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 AC171003.1-201ENSMUST00000221667 1665 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm15789-201ENSMUST00000118992 1359 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm9030-201ENSMUST00000218405 2410 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm9029-201ENSMUST00000219232 2410 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Gm44950-201ENSMUST00000206403 2296 ntBASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Cacna1fQ9JIS7 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm22267-201ENSMUST00000104008 131 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm15422-201ENSMUST00000117453 541 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm14741-201ENSMUST00000120777 1009 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm16016-201ENSMUST00000120831 550 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm9167-201ENSMUST00000182469 962 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm28958-201ENSMUST00000185864 703 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm29663-201ENSMUST00000186962 853 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 AC124601.1-201ENSMUST00000220531 135 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Zfp865-202ENSMUST00000076791 1129 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Fam198b-201ENSMUST00000029567 6627 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm15575-201ENSMUST00000119414 1581 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Trpm8-201ENSMUST00000040210 4146 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm12140-201ENSMUST00000121214 544 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm15696-201ENSMUST00000121730 445 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm8648-201ENSMUST00000122457 221 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Mir1900-201ENSMUST00000122714 78 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm23968-201ENSMUST00000175047 125 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12l1-201ENSMUST00000183090 399 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm37191-201ENSMUST00000193346 388 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm37322-201ENSMUST00000193409 337 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cacna1fQ9JIS7 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms