Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm15110-201ENSMUST00000117545 881 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm11905-201ENSMUST00000117653 678 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm14624-201ENSMUST00000117746 192 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm11845-201ENSMUST00000117886 327 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm2318-201ENSMUST00000119623 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm13576-201ENSMUST00000120851 778 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 AA623943-201ENSMUST00000121794 354 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm14813-201ENSMUST00000122291 395 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 4931429L15Rik-203ENSMUST00000172280 1140 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Sdhd-201ENSMUST00000000175 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm7438-201ENSMUST00000177664 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm7408-201ENSMUST00000178014 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm7386-201ENSMUST00000178020 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm3657-201ENSMUST00000178170 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm7415-201ENSMUST00000178205 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm21909-201ENSMUST00000178260 439 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm7398-201ENSMUST00000178589 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm7391-201ENSMUST00000178680 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm7375-201ENSMUST00000179232 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm3681-201ENSMUST00000179940 639 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm9381-201ENSMUST00000182285 1012 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm20936-201ENSMUST00000191049 658 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm43711-201ENSMUST00000195994 373 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm43394-201ENSMUST00000198671 694 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm18452-201ENSMUST00000202968 1111 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm9373-201ENSMUST00000208724 599 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm45436-201ENSMUST00000210729 469 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm17997-201ENSMUST00000211801 840 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm18504-201ENSMUST00000220917 929 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 AC174082.2-201ENSMUST00000222094 543 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 CT571271.1-201ENSMUST00000227071 670 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 AC134577.2-201ENSMUST00000228541 715 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 n-R5s74-201ENSMUST00000082654 116 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm24146-201ENSMUST00000082760 321 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 n-R5s196-201ENSMUST00000083136 117 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Tmem241-203ENSMUST00000092075 595 ntAPPRIS ALT2 TSL 3 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Zfp791-201ENSMUST00000098550 1587 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Naalad2-204ENSMUST00000166825 2799 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Asb14-203ENSMUST00000165929 1817 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 AC117656.3-203ENSMUST00000225007 1809 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Serpina3k-201ENSMUST00000043058 2057 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 2310015K22Rik-201ENSMUST00000191452 1461 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Olfr444-202ENSMUST00000204092 1472 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 4930543E12Rik-202ENSMUST00000210408 1429 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Trim39Q9ESN2 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Ttc41-203ENSMUST00000217747 1949 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Ap1s3-203ENSMUST00000162342 2876 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC7.6□□□□□ -1.19
Trim39Q9ESN2 Gm42656-201ENSMUST00000201506 2305 ntBASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms