Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Cstf3Q99LI7 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.97□□□□□ -1.29
Cstf3Q99LI7 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.97□□□□□ -1.29
Cstf3Q99LI7 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cstf3Q99LI7 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Cstf3Q99LI7 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
Cstf3Q99LI7 CT025639.1-201ENSMUST00000223906 1375 ntBASIC6.96□□□□□ -1.29
Cstf3Q99LI7 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Cstf3Q99LI7 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.29
Cstf3Q99LI7 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Cstf3Q99LI7 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.96□□□□□ -1.29
Cstf3Q99LI7 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Cstf3Q99LI7 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm15186-201ENSMUST00000119345 563 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm11954-201ENSMUST00000121403 349 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm22885-201ENSMUST00000157410 107 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm28416-201ENSMUST00000188334 292 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm37729-201ENSMUST00000194761 1172 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm37724-201ENSMUST00000195240 1221 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm43226-201ENSMUST00000202438 259 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 AC158531.2-201ENSMUST00000224264 473 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 AC154461.4-201ENSMUST00000224878 468 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 AC158981.1-201ENSMUST00000226943 1205 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.96□□□□□ -1.3
Cstf3Q99LI7 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm14016-201ENSMUST00000119095 486 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm15665-201ENSMUST00000119116 847 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm11259-201ENSMUST00000120554 715 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm14787-201ENSMUST00000121236 388 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm11688-201ENSMUST00000122145 308 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm22275-201ENSMUST00000122470 310 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm24139-201ENSMUST00000122780 288 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm10086-201ENSMUST00000136334 354 ntBASIC6.95□□□□□ -1.3
Cstf3Q99LI7 Gm5272-201ENSMUST00000182730 982 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 179.4 ms