Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Col6a6Q8C6K9 Gm21846-201ENSMUST00000179257 3073 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 St6galnac1-201ENSMUST00000009732 2392 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm2694-201ENSMUST00000180700 2314 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm16056-201ENSMUST00000119293 135 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Mir1929-201ENSMUST00000158635 93 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm412-201ENSMUST00000193360 948 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm2040-201ENSMUST00000202979 289 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 AC124103.1-201ENSMUST00000227564 1027 ntBASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC6.49□□□□□ -1.37
Col6a6Q8C6K9 Gm21043-201ENSMUST00000199316 1517 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm2178-201ENSMUST00000104927 357 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm44163-201ENSMUST00000205140 475 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm46424-201ENSMUST00000221567 168 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm2754-201ENSMUST00000223383 589 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Ptpro-207ENSMUST00000203914 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Olfr1395-202ENSMUST00000203377 2883 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm7658-201ENSMUST00000119064 1124 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm4853-201ENSMUST00000119359 394 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm37809-201ENSMUST00000195050 931 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm43501-201ENSMUST00000202513 107 ntBASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.48□□□□□ -1.37
Col6a6Q8C6K9 Gm38574-201ENSMUST00000211855 640 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms