Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm23740-201ENSMUST00000157385 100 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm24286-201ENSMUST00000157632 128 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm23077-201ENSMUST00000157854 116 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Mir1930-201ENSMUST00000158799 84 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm27972-201ENSMUST00000184720 137 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Ighv1-17-201ENSMUST00000194435 350 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm18593-201ENSMUST00000200754 1139 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Vmn1r41-202ENSMUST00000226337 888 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 AC121542.2-201ENSMUST00000227529 400 ntBASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ccdc60Q8C4J0 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Ccdc60Q8C4J0 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ccdc60Q8C4J0 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ccdc60Q8C4J0 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ccdc60Q8C4J0 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Ccdc60Q8C4J0 Folh1-202ENSMUST00000107271 2516 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Ccdc60Q8C4J0 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 AC107763.1-202ENSMUST00000225021 2663 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm37924-201ENSMUST00000195470 3647 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm22781-201ENSMUST00000104083 137 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm25631-201ENSMUST00000104390 130 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm17184-201ENSMUST00000111864 462 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm15000-201ENSMUST00000118275 1243 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm13900-201ENSMUST00000119402 498 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm9439-201ENSMUST00000119554 973 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm26183-201ENSMUST00000157685 139 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm4373-201ENSMUST00000178571 556 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm26528-201ENSMUST00000181965 283 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm28580-201ENSMUST00000186767 88 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm28413-201ENSMUST00000189369 291 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gm44185-201ENSMUST00000204539 3307 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 AC122769.1-201ENSMUST00000226930 1714 ntBASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC9.02□□□□□ -0.97
Ccdc60Q8C4J0 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Gm42568-201ENSMUST00000195639 1841 ntBASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Mir697-201ENSMUST00000102316 109 ntBASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Gm14904-201ENSMUST00000117067 335 ntBASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Gm11338-201ENSMUST00000120086 1160 ntBASIC9.01□□□□□ -0.97
Ccdc60Q8C4J0 Gm12477-201ENSMUST00000121221 571 ntBASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms