Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm29305-201ENSMUST00000191054 2167 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Ercc3-201ENSMUST00000025241 2708 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Fam110c-201ENSMUST00000041133 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim35Q8C006 Zbtb37-205ENSMUST00000171748 2141 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Btbd35f2-201ENSMUST00000179991 1949 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trim35Q8C006 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Ppfibp1-202ENSMUST00000111623 4782 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 B3gat1-205ENSMUST00000161115 3426 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 AC159810.1-201ENSMUST00000214838 1480 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm13197-201ENSMUST00000117204 225 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm13777-201ENSMUST00000118208 345 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm15798-201ENSMUST00000120082 408 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm6276-201ENSMUST00000120159 579 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Llph-ps2-201ENSMUST00000122000 393 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm12221-201ENSMUST00000125096 1131 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Trim35Q8C006 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm7805-201ENSMUST00000154348 448 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm24857-201ENSMUST00000158061 310 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm37921-201ENSMUST00000194333 695 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm43985-201ENSMUST00000203283 757 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm44162-201ENSMUST00000203543 544 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm45731-201ENSMUST00000211988 1203 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC9.87□□□□□ -0.83
Trim35Q8C006 AC154576.2-202ENSMUST00000223916 688 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 AC163638.2-201ENSMUST00000224920 827 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm25482-201ENSMUST00000083225 107 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm24917-201ENSMUST00000083935 104 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Pik3c3-201ENSMUST00000091978 2998 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Nbr1-206ENSMUST00000107213 4339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Pdk4-201ENSMUST00000019721 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm6493-201ENSMUST00000159889 1786 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Wipf3-206ENSMUST00000172046 4204 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Gm37460-201ENSMUST00000191796 2249 ntBASIC9.87□□□□□ -0.83
Trim35Q8C006 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Itm2a-201ENSMUST00000033591 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Lonp2-203ENSMUST00000122188 2372 ntTSL 2 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Trim35Q8C006 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Trim35Q8C006 Optn-202ENSMUST00000114996 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Piwil4-201ENSMUST00000076946 2637 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm3962-201ENSMUST00000173027 2587 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Arpp19-209ENSMUST00000169492 3963 ntTSL 2 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Trim35Q8C006 Grm3-201ENSMUST00000004076 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm8864-201ENSMUST00000118653 1010 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm12042-201ENSMUST00000120479 301 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm14633-201ENSMUST00000121152 470 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC9.86□□□□□ -0.83
Trim35Q8C006 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Trim35Q8C006 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms