Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm24434-201ENSMUST00000104081 132 ntBASIC6.23□□□□□ -1.41
Rif1Q6PR54 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm27355-201ENSMUST00000185045 128 ntBASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Ly6a-205ENSMUST00000189068 878 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm43724-201ENSMUST00000197516 226 ntBASIC6.23□□□□□ -1.41
Rif1Q6PR54 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm5055-201ENSMUST00000215697 581 ntBASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm34304-201ENSMUST00000218927 1139 ntTSL 5 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Rif1Q6PR54 AC168062.1-201ENSMUST00000228048 769 ntBASIC6.23□□□□□ -1.41
Rif1Q6PR54 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Rif1Q6PR54 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Pikfyve-202ENSMUST00000097707 6641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Wdpcp-201ENSMUST00000020568 2792 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm36952-201ENSMUST00000194923 3625 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Pus7-206ENSMUST00000148618 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm12650-201ENSMUST00000121966 258 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm25164-201ENSMUST00000158908 116 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm10591-201ENSMUST00000178168 402 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Ccl21b-202ENSMUST00000178864 402 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm43054-201ENSMUST00000199495 884 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm43850-201ENSMUST00000202021 578 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm5373-201ENSMUST00000212113 1050 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Ccnt1-201ENSMUST00000012104 2175 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm37785-201ENSMUST00000195783 2408 ntBASIC6.22□□□□□ -1.41
Rif1Q6PR54 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Rif1Q6PR54 Gm43679-201ENSMUST00000197051 3677 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm13451-201ENSMUST00000117649 592 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm12870-201ENSMUST00000121383 1016 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.21□□□□□ -1.41
Rif1Q6PR54 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm4962-201ENSMUST00000199640 2977 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.21□□□□□ -1.41
Rif1Q6PR54 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.21□□□□□ -1.41
Rif1Q6PR54 Nedd4l-204ENSMUST00000224347 3150 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Rif1Q6PR54 Gm43890-201ENSMUST00000203437 2799 ntBASIC6.21□□□□□ -1.41
Rif1Q6PR54 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Rif1Q6PR54 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms