Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm11858-201ENSMUST00000117935 838 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm13798-201ENSMUST00000118285 139 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm12844-201ENSMUST00000119463 582 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm9439-201ENSMUST00000119554 973 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Mir1930-201ENSMUST00000158799 84 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Mir6357-201ENSMUST00000184246 104 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm5261-201ENSMUST00000185860 713 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm28117-201ENSMUST00000188472 371 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm17965-201ENSMUST00000193904 517 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm42782-201ENSMUST00000197286 522 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm44971-201ENSMUST00000206192 337 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm46424-201ENSMUST00000221567 168 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 AC159205.7-201ENSMUST00000225988 692 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm17841-201ENSMUST00000210711 2425 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC6.28□□□□□ -1.4
Nkx3-1P97436 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Nkx3-1P97436 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Olfr115-202ENSMUST00000221552 2295 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm8662-201ENSMUST00000118644 574 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm8215-201ENSMUST00000120627 990 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm26480-201ENSMUST00000122619 297 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm25617-201ENSMUST00000179548 133 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm29354-201ENSMUST00000187613 696 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm4856-201ENSMUST00000192696 1091 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm25617-202ENSMUST00000198387 132 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm44279-201ENSMUST00000205154 472 ntBASIC6.27□□□□□ -1.41
Nkx3-1P97436 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC6.27□□□□□ -1.41
Nkx3-1P97436 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms