Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm6798-201ENSMUST00000119961 360 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm4773-201ENSMUST00000120392 702 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm13358-201ENSMUST00000121427 569 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm14328-201ENSMUST00000122178 408 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm15116-201ENSMUST00000122248 663 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm9064-201ENSMUST00000163579 566 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm24083-201ENSMUST00000175174 120 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm25690-201ENSMUST00000175439 77 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Mir7115-201ENSMUST00000184275 64 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm20813-201ENSMUST00000186646 705 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm28859-201ENSMUST00000186650 616 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm21617-201ENSMUST00000188297 691 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm28927-201ENSMUST00000191528 272 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm6197-201ENSMUST00000192273 454 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm38261-201ENSMUST00000192608 316 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm43232-201ENSMUST00000201346 364 ntBASIC7.18□□□□□ -1.26
SgcbP82349 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC7.18□□□□□ -1.26
SgcbP82349 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 AC161374.1-201ENSMUST00000224191 794 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm7086-202ENSMUST00000228849 506 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Olfr901-201ENSMUST00000063716 936 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SgcbP82349 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Wdr48-208ENSMUST00000217472 2997 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm37407-201ENSMUST00000194793 1316 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Btn2a2-203ENSMUST00000110433 2370 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm42811-201ENSMUST00000201951 2768 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Bdnf-208ENSMUST00000111049 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Gm6368-201ENSMUST00000119727 2147 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SgcbP82349 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SgcbP82349 Gm44883-201ENSMUST00000206063 3258 ntBASIC7.18□□□□□ -1.26
SgcbP82349 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC7.17□□□□□ -1.26
SgcbP82349 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC7.17□□□□□ -1.26
SgcbP82349 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
SgcbP82349 Gm6819-201ENSMUST00000185325 1891 ntBASIC7.17□□□□□ -1.26
SgcbP82349 Extl2-201ENSMUST00000029575 3000 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Prom1-204ENSMUST00000087442 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Supt5-201ENSMUST00000003527 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC7.17□□□□□ -1.26
SgcbP82349 Lrrc66-201ENSMUST00000087177 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.17□□□□□ -1.26
SgcbP82349 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SgcbP82349 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SgcbP82349 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
SgcbP82349 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SgcbP82349 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC7.17□□□□□ -1.26
SgcbP82349 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms