Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm6P62313 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.32□□□□□ -1.4
Lsm6P62313 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC6.32□□□□□ -1.4
Lsm6P62313 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Lsm6P62313 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Lsm6P62313 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
Lsm6P62313 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Lsm6P62313 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Lsm6P62313 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Lsm6P62313 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Lsm6P62313 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm18359-201ENSMUST00000173024 1459 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm25614-201ENSMUST00000104013 133 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm6746-201ENSMUST00000108774 483 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm2735-201ENSMUST00000136133 277 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm2709-201ENSMUST00000142979 350 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm7393-201ENSMUST00000172650 739 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Mir199b-201ENSMUST00000175066 110 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm20813-201ENSMUST00000186646 705 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm29354-201ENSMUST00000187613 696 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm21923-201ENSMUST00000188455 696 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm37689-201ENSMUST00000193139 275 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm37349-201ENSMUST00000194205 624 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm23011-202ENSMUST00000197855 275 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm43725-201ENSMUST00000200122 369 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm43905-201ENSMUST00000204516 204 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm44833-201ENSMUST00000208368 331 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC6.31□□□□□ -1.4
Lsm6P62313 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 AC156574.1-201ENSMUST00000227084 452 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Lsm6P62313 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Lsm6P62313 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.31□□□□□ -1.4
Lsm6P62313 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lsm6P62313 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lsm6P62313 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm6P62313 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm6P62313 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Lsm6P62313 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Lsm6P62313 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.3□□□□□ -1.4
Lsm6P62313 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm6P62313 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm6P62313 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lsm6P62313 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Lsm6P62313 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Lsm6P62313 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Lsm6P62313 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms